Mustela putorius furo      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 113 genes.  Reviewed (0 or Unreviewed (113

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Mup-0366
ENSMPUG00000001502.1
M3XQY8
2
LLPS-Mup-0461
ENSMPUG00000004035.1
M3XY50
3
LLPS-Mup-0556
ENSMPUG00000013408.1
M3YPQ1
4
LLPS-Mup-0590
ENSMPUG00000002059.1
M3XSI8
5
LLPS-Mup-0846
ENSMPUG00000015831.1
M3YWL3
6
LLPS-Mup-1065
ENSMPUG00000000335.1
M3XMN1
7
LLPS-Mup-1109
ENSMPUG00000020173.1
M3Z8X4
8
LLPS-Mup-1546
ENSMPUG00000000762.1
M3XNW0
9
LLPS-Mup-1626
ENSMPUG00000014931.1
M3YU10
10
LLPS-Mup-1798
ENSMPUG00000012361.1
M3YLR1
11
LLPS-Mup-2613
ENSMPUG00000006775.1
M3Y5X0
12
LLPS-Mup-3067
ENSMPUG00000005543.1
M3Y2F1
13
LLPS-Mup-4318
ENSMPUG00000006135.1
M3Y432
14
LLPS-Mup-4557
ENSMPUG00000014433.1
M3YSL6
15
LLPS-Mup-1124
ENSMPUG00000001930.1
M3XS64
AGO2
16
LLPS-Mup-3794
ENSMPUG00000001208.1
M3XQ48
AKAP17A
17
LLPS-Mup-1436
ENSMPUG00000010996.1
M3YHV0
ANXA10
18
LLPS-Mup-0691
ENSMPUG00000001705.1
M3XRI8
ARL6IP4
19
LLPS-Mup-3435
ENSMPUG00000012022.1
M3YKS3
ATR
20
LLPS-Mup-3324
ENSMPUG00000005642.1
M3Y2P6
BCAS2
21
LLPS-Mup-0204
ENSMPUG00000012876.1
M3YN71
C9orf78
22
LLPS-Mup-0662
ENSMPUG00000005752.1
M3Y304
CARM1
23
LLPS-Mup-0310
ENSMPUG00000014903.1
M3YTY2
CASC3
24
LLPS-Mup-3384
ENSMPUG00000002825.1
M3XUP6
CCNL1
25
LLPS-Mup-0682
ENSMPUG00000012546.1
M3YM94
CDC5L
26
LLPS-Mup-1459
ENSMPUG00000011057.1
M3YI10
CDK1
27
LLPS-Mup-0468
ENSMPUG00000014611.1
M3YT41
CDK7
28
LLPS-Mup-2299
ENSMPUG00000013681.1
M3YQG9
CDK9
29
LLPS-Mup-4364
ENSMPUG00000002901.1
M3XUX2
CDKL5
30
LLPS-Mup-0501
ENSMPUG00000004900.1
M3Y0K9
COP1
31
LLPS-Mup-1964
ENSMPUG00000014255.1
M3YS36
CSNK1A1
32
LLPS-Mup-0012
ENSMPUG00000017761.1
M3Z237
CTNNBL1
33
LLPS-Mup-1159
ENSMPUG00000011407.1
M3YJ08
DDX39B
34
LLPS-Mup-0831
ENSMPUG00000010045.1
M3YF63
DDX46
35
LLPS-Mup-0488
ENSMPUG00000004005.1
M3XY21
DGCR8
36
LLPS-Mup-3524
ENSMPUG00000002977.1
M3XV48
DNAJB1
37
LLPS-Mup-0815
ENSMPUG00000008744.1
M3YBG6
DNAJC17
38
LLPS-Mup-0847
ENSMPUG00000010083.1
M3YFA1
DYRK3
39
LLPS-Mup-2069
ENSMPUG00000008530.1
M3YAV8
EGF
40
LLPS-Mup-0534
ENSMPUG00000007389.1
M3Y7M4
ERH
41
LLPS-Mup-2993
ENSMPUG00000010144.1
M3YFG0
EZH1
42
LLPS-Mup-3369
ENSMPUG00000012280.1
M3YLH6
FAM76B
43
LLPS-Mup-2225
ENSMPUG00000017150.1
M3Z0D0
FANCD2
44
LLPS-Mup-2339
ENSMPUG00000015791.1
M3YWH3
FANCI
45
LLPS-Mup-2222
ENSMPUG00000016613.1
M3YYV0
FBXL18
46
LLPS-Mup-0209
ENSMPUG00000009649.1
M3YE16
FGFR1
47
LLPS-Mup-3595
ENSMPUG00000011965.1
M3YKL6
FRMD8
48
LLPS-Mup-2174
ENSMPUG00000004085.1
M3XYA0
FYTTD1
49
LLPS-Mup-3013
ENSMPUG00000018143.1
M3Z370
GLI3
50
LLPS-Mup-1741
ENSMPUG00000008359.1
M3YAD9
GSK3B
51
LLPS-Mup-1012
ENSMPUG00000006515.1
M3Y559
HIF1A
52
LLPS-Mup-2574
ENSMPUG00000005285.1
M3Y1P6
HIF3A
53
LLPS-Mup-4136
ENSMPUG00000003745.1
M3XXB5
HIPK2
54
LLPS-Mup-1697
ENSMPUG00000004554.1
M3XZL8
HNRNPA2B1
55
LLPS-Mup-2046
ENSMPUG00000004482.1
M3XZE6
HSPH1
56
LLPS-Mup-3537
ENSMPUG00000008267.1
M3YA48
ILF2
57
LLPS-Mup-2187
ENSMPUG00000006205.1
M3Y4A1
ILF3
58
LLPS-Mup-3026
ENSMPUG00000011924.1
M3YKH7
IVNS1ABP
59
LLPS-Mup-1665
ENSMPUG00000016042.1
M3YX75
LUC7L
60
LLPS-Mup-2189
ENSMPUG00000006600.1
M3Y5E4
MAGOH
61
LLPS-Mup-4517
ENSMPUG00000007382.1
M3Y7L7
NAGK
62
LLPS-Mup-1765
ENSMPUG00000004937.1
M3Y0P7
NONO
63
LLPS-Mup-0119
ENSMPUG00000002583.1
M3XU04
NOSIP
64
LLPS-Mup-3467
ENSMPUG00000013973.1
M3YRA9
NR5A1
65
LLPS-Mup-1301
ENSMPUG00000013859.1
M3YQZ7
NSRP1
66
LLPS-Mup-0335
ENSMPUG00000011884.1
M3YKD7
NUAK2
67
LLPS-Mup-0702
ENSMPUG00000013658.1
M3YQE6
NXF1
68
LLPS-Mup-1001
ENSMPUG00000017122.1
M3Z0A2
OGG1
69
LLPS-Mup-2255
ENSMPUG00000018975.1
M3Z5J3
P2RY12
70
LLPS-Mup-0706
ENSMPUG00000007175.1
M3Y713
PCBP1
71
LLPS-Mup-3617
ENSMPUG00000005590.1
M3Y2J6
PLRG1
72
LLPS-Mup-1690
ENSMPUG00000016225.1
G9KHJ2
PNN
73
LLPS-Mup-0988
ENSMPUG00000000779.1
M3XNX7
PPIG
74
LLPS-Mup-4042
ENSMPUG00000014432.1
M3YSL5
PRPF19
75
LLPS-Mup-1503
ENSMPUG00000013227.1
M3YP72
PRPF8
76
LLPS-Mup-3672
ENSMPUG00000006126.1
M3Y424
PSMA3
77
LLPS-Mup-0813
ENSMPUG00000013347.1
M3YPJ0
PSPC1
78
LLPS-Mup-1169
ENSMPUG00000009545.1
M3YDR1
PTBP1
79
LLPS-Mup-2602
ENSMPUG00000012577.1
M3YMC6
RAPGEF1
80
LLPS-Mup-2929
ENSMPUG00000016359.1
M3YY46
RBM17
81
LLPS-Mup-4555
ENSMPUG00000007151.1
M3Y6Z1
RBM23
82
LLPS-Mup-4388
ENSMPUG00000015546.1
M3YVS5
RNF151
83
LLPS-Mup-0889
ENSMPUG00000000885.1
M3XP81
SARNP
84
LLPS-Mup-0857
ENSMPUG00000012684.1
M3YMN3
SF1
85
LLPS-Mup-1230
ENSMPUG00000013144.1
M3YNZ0
SF3A1
86
LLPS-Mup-1400
ENSMPUG00000006956.1
M3Y6F0
SF3A2
87
LLPS-Mup-2244
ENSMPUG00000014519.1
M3YSU9
SF3A3
88
LLPS-Mup-0793
ENSMPUG00000007799.1
M3Y8T5
SF3B1
89
LLPS-Mup-1029
ENSMPUG00000008949.1
M3YC22
SNRNP200
90
LLPS-Mup-3503
ENSMPUG00000019392.1
M3Z6Q2
SNRNP35
91
LLPS-Mup-2964
ENSMPUG00000003258.1
M3XVX6
SNRNP70
92
LLPS-Mup-0696
ENSMPUG00000017681.1
M3Z1V7
SNRPA
93
LLPS-Mup-0440
ENSMPUG00000010938.1
M3YHP4
SNRPA1
94
LLPS-Mup-2883
ENSMPUG00000001290.1
M3XQC9
SON
95
LLPS-Mup-2464
ENSMPUG00000015389.1
M3YVB9
SPOP
96
LLPS-Mup-2734
ENSMPUG00000015264.1
M3YUZ4
SRRM2
97
LLPS-Mup-3182
ENSMPUG00000015369.1
M3YV99
SRSF1
98
LLPS-Mup-0530
ENSMPUG00000000892.1
M3XP88
SRSF11
99
LLPS-Mup-3630
ENSMPUG00000014215.1
M3YRZ6
SRSF3
100
LLPS-Mup-0981
ENSMPUG00000015470.1
M3YVJ9
SRSF4
101
LLPS-Mup-2621
ENSMPUG00000003193.1
M3XVR0
SRSF9
102
LLPS-Mup-1659
ENSMPUG00000010509.1
M3YGH5
STAT3
103
LLPS-Mup-3387
ENSMPUG00000001935.1
M3XS69
TAP1
104
LLPS-Mup-1671
ENSMPUG00000006676.1
M3Y5M1
TGFBR1
105
LLPS-Mup-0329
ENSMPUG00000003157.1
M3XVM4
TRA2B
106
LLPS-Mup-2365
ENSMPUG00000002322.1
M3XT98
TTC14
107
LLPS-Mup-1734
ENSMPUG00000007135.1
M3Y6X6
U2AF2
108
LLPS-Mup-0055
ENSMPUG00000011855.1
M3YKA5
U2SURP
109
LLPS-Mup-0191
ENSMPUG00000005560.1
M3Y2G7
XPO1
110
LLPS-Mup-2473
ENSMPUG00000001743.1
M3XRM5
YTHDC1
111
LLPS-Mup-0551
ENSMPUG00000011630.1
M3YJN1
ZC3H11A
112
LLPS-Mup-1115
ENSMPUG00000009839.1
M3YEK9
ZNF106
113
LLPS-Mup-2196
ENSMPUG00000012305.1
M3YLK2
ZNF688