Macaca fascicularis      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 119 genes.  Reviewed (0 or Unreviewed (119

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Maf-0497
ENSMFAG00000033122.1
2
LLPS-Maf-0530
ENSMFAG00000044244.1
3
LLPS-Maf-0674
ENSMFAG00000003743.1
4
LLPS-Maf-0753
ENSMFAG00000031084.1
5
LLPS-Maf-0773
ENSMFAG00000032728.1
6
LLPS-Maf-0792
ENSMFAG00000031153.1
7
LLPS-Maf-1049
ENSMFAG00000002620.1
8
LLPS-Maf-1117
ENSMFAG00000031794.1
9
LLPS-Maf-1178
ENSMFAG00000045270.1
10
LLPS-Maf-1214
ENSMFAG00000031355.1
11
LLPS-Maf-1306
ENSMFAG00000000797.1
12
LLPS-Maf-1385
ENSMFAG00000041077.1
13
LLPS-Maf-1452
ENSMFAG00000002638.1
14
LLPS-Maf-1724
ENSMFAG00000038325.1
15
LLPS-Maf-2314
ENSMFAG00000034524.1
16
LLPS-Maf-2451
ENSMFAG00000043933.1
17
LLPS-Maf-2672
ENSMFAG00000038258.1
18
LLPS-Maf-2863
ENSMFAG00000045524.1
19
LLPS-Maf-3143
ENSMFAG00000037262.1
20
LLPS-Maf-3270
ENSMFAG00000036743.1
21
LLPS-Maf-4075
ENSMFAG00000002833.1
22
LLPS-Maf-4204
ENSMFAG00000041637.1
23
LLPS-Maf-4542
ENSMFAG00000034223.1
24
LLPS-Maf-0924
ENSMFAG00000030479.1
G7PBL1
ANXA2
25
LLPS-Maf-4356
ENSMFAG00000041882.1
G7PRD0
C9orf78
26
LLPS-Maf-3482
ENSMFAG00000030104.1
G7NZJ7
CCNL1
27
LLPS-Maf-0226
ENSMFAG00000000812.1
G7P4R2
CDC5L
28
LLPS-Maf-1314
ENSMFAG00000033708.1
G7PH92
DGCR8
29
LLPS-Maf-1642
ENSMFAG00000032241.1
G7PAX7
DNAJC17
30
LLPS-Maf-1974
ENSMFAG00000046011.1
G7NVV8
EGM_00350
31
LLPS-Maf-2012
ENSMFAG00000043047.1
G7NUB2
EGM_00508
32
LLPS-Maf-3818
ENSMFAG00000043405.1
G7NWZ3
EGM_00745
33
LLPS-Maf-2554
ENSMFAG00000037304.1
G7NUH5
EGM_01121
34
LLPS-Maf-4587
ENSMFAG00000034535.1
G7NXB5
EGM_01306
35
LLPS-Maf-4612
ENSMFAG00000041236.1
G7NVB2
EGM_01454
36
LLPS-Maf-0931
ENSMFAG00000038432.1
G7NVD3
EGM_01477
37
LLPS-Maf-2124
ENSMFAG00000003997.1
G7NVF0
EGM_01498
38
LLPS-Maf-1657
ENSMFAG00000035358.1
G7NVJ2
EGM_01718
39
LLPS-Maf-0065
ENSMFAG00000045863.1
G7PGF2
EGM_02106
40
LLPS-Maf-3078
ENSMFAG00000031283.1
G7PH05
EGM_02342
41
LLPS-Maf-4134
ENSMFAG00000035672.1
G7PL38
EGM_04178
42
LLPS-Maf-1335
ENSMFAG00000030831.1
G7PL76
EGM_04219
43
LLPS-Maf-0585
ENSMFAG00000001980.1
Q4R4Z7
EGM_04737
44
LLPS-Maf-2500
ENSMFAG00000043524.1
G7PMG1
EGM_04903
45
LLPS-Maf-0668
ENSMFAG00000040174.1
G7PMQ6
EGM_05017
46
LLPS-Maf-3567
ENSMFAG00000033272.1
G7PPI2
EGM_05433
47
LLPS-Maf-2756
ENSMFAG00000045399.1
G7PPS6
EGM_05486
48
LLPS-Maf-1468
ENSMFAG00000038154.1
G7PRA8
EGM_06582
49
LLPS-Maf-0969
ENSMFAG00000044981.1
G7PRU8
EGM_06805
50
LLPS-Maf-2877
ENSMFAG00000042755.1
G7PSL8
EGM_07121
51
LLPS-Maf-1105
ENSMFAG00000039995.1
G7PSZ7
EGM_07229
52
LLPS-Maf-1058
ENSMFAG00000014745.1
G7PTZ6
EGM_07575
53
LLPS-Maf-1091
ENSMFAG00000040003.1
G7PUF0
EGM_07756
54
LLPS-Maf-2052
ENSMFAG00000041496.1
G7PUN6
EGM_07865
55
LLPS-Maf-0552
ENSMFAG00000040992.1
G7PUU7
EGM_07935
56
LLPS-Maf-0946
ENSMFAG00000001394.1
G7PT56
EGM_08282
57
LLPS-Maf-2748
ENSMFAG00000018638.1
G7PVY9
EGM_08381
58
LLPS-Maf-0671
ENSMFAG00000039557.1
G7PZD4
EGM_09260
59
LLPS-Maf-4738
ENSMFAG00000036898.1
G7PZE0
EGM_09266
60
LLPS-Maf-1718
ENSMFAG00000042314.1
G7PZL9
EGM_09361
61
LLPS-Maf-1762
ENSMFAG00000025583.1
G7PXY3
EGM_09889
62
LLPS-Maf-0316
ENSMFAG00000039824.1
G7PY61
EGM_09962
63
LLPS-Maf-1630
ENSMFAG00000038383.1
G7PZ01
EGM_10153
64
LLPS-Maf-3616
ENSMFAG00000032527.1
G7NYU4
EGM_10479
65
LLPS-Maf-4124
ENSMFAG00000041227.1
G7NY69
EGM_10752
66
LLPS-Maf-0208
ENSMFAG00000042624.1
G7NYM6
EGM_10813
67
LLPS-Maf-2971
ENSMFAG00000046249.1
G7NZ23
EGM_10864
68
LLPS-Maf-2994
ENSMFAG00000036474.1
G7NZL9
EGM_10984
69
LLPS-Maf-3977
ENSMFAG00000001151.1
G7P010
EGM_11028
70
LLPS-Maf-2689
ENSMFAG00000035160.1
G7Q070
EGM_11341
71
LLPS-Maf-2438
ENSMFAG00000042142.1
G7Q091
EGM_11364
72
LLPS-Maf-2780
ENSMFAG00000003406.1
G7Q0A5
EGM_11382
73
LLPS-Maf-3264
ENSMFAG00000033034.1
G7Q0Y1
EGM_11652
74
LLPS-Maf-3741
ENSMFAG00000031231.1
G7P2B0
EGM_12565
75
LLPS-Maf-2337
ENSMFAG00000002536.1
G7P0P7
EGM_12678
76
LLPS-Maf-2026
ENSMFAG00000001456.1
G7P0Y0
EGM_13005
77
LLPS-Maf-1409
ENSMFAG00000034233.1
G7P4N8
EGM_13439
78
LLPS-Maf-1629
ENSMFAG00000002707.1
G7P3C0
EGM_13542
79
LLPS-Maf-2358
ENSMFAG00000031846.1
G7P2W2
EGM_13711
80
LLPS-Maf-3400
ENSMFAG00000031927.1
G7P5Q2
EGM_14467
81
LLPS-Maf-1937
ENSMFAG00000003730.1
G7P635
EGM_14614
82
LLPS-Maf-1989
ENSMFAG00000001816.1
G7P6F6
EGM_14760
83
LLPS-Maf-4366
ENSMFAG00000002951.1
G7P6J2
EGM_14804
84
LLPS-Maf-2306
ENSMFAG00000001451.1
G7P7N5
EGM_15116
85
LLPS-Maf-3815
ENSMFAG00000024381.1
G7P7V0
EGM_15194
86
LLPS-Maf-1346
ENSMFAG00000044528.1
G7P8B1
EGM_15393
87
LLPS-Maf-0354
ENSMFAG00000030995.1
G7P8N3
EGM_15536
88
LLPS-Maf-1500
ENSMFAG00000031499.1
G7PB03
EGM_15896
89
LLPS-Maf-2933
ENSMFAG00000001781.1
G7P8W5
EGM_16074
90
LLPS-Maf-0478
ENSMFAG00000021023.1
G7P9K0
EGM_16338
91
LLPS-Maf-0278
ENSMFAG00000037595.1
G7P9U5
EGM_16442
92
LLPS-Maf-1174
ENSMFAG00000003712.1
G7PA51
EGM_16571
93
LLPS-Maf-0444
ENSMFAG00000032083.1
G7PAH1
EGM_16704
94
LLPS-Maf-0778
ENSMFAG00000042874.1
G7PAL1
EGM_16755
95
LLPS-Maf-1015
ENSMFAG00000034537.1
G7PD75
EGM_17245
96
LLPS-Maf-2148
ENSMFAG00000015384.1
G7PD11
EGM_17655
97
LLPS-Maf-2846
ENSMFAG00000035521.1
G7PE58
EGM_17780
98
LLPS-Maf-4773
ENSMFAG00000030921.1
G7Q2B5
EGM_18597
99
LLPS-Maf-2647
ENSMFAG00000003304.1
G7Q3L1
EGM_19136
100
LLPS-Maf-2410
ENSMFAG00000032474.1
G8F6B8
EGM_19486
101
LLPS-Maf-1443
ENSMFAG00000033992.1
G8F4L9
EGM_20484
102
LLPS-Maf-0389
ENSMFAG00000031561.1
G8F5C0
EGM_20824
103
LLPS-Maf-3122
ENSMFAG00000039345.1
G8F2H5
EGM_20885
104
LLPS-Maf-3353
ENSMFAG00000041369.1
G8F5I5
EGM_20931
105
LLPS-Maf-3633
ENSMFAG00000014353.1
G8F5P1
EGM_20985
106
LLPS-Maf-3692
ENSMFAG00000034427.1
G8F5Z7
EGM_21148
107
LLPS-Maf-0930
ENSMFAG00000032160.1
G8F640
EGM_21213
108
LLPS-Maf-2011
ENSMFAG00000042981.1
G7PNI3
FAM76B
109
LLPS-Maf-4714
ENSMFAG00000035758.1
G7P9E7
FANCI
110
LLPS-Maf-2597
ENSMFAG00000039625.1
G7NXF4
IVNS1ABP
111
LLPS-Maf-1839
ENSMFAG00000032145.1
G7NVQ3
MAGOH
112
LLPS-Maf-1489
ENSMFAG00000041557.1
G7Q300
NONO
113
LLPS-Maf-1710
ENSMFAG00000031979.1
G7PF65
SF3A1
114
LLPS-Maf-0628
ENSMFAG00000008986.1
G8F2U7
SNRNP35
115
LLPS-Maf-1916
ENSMFAG00000041710.1
G7PXM6
SNRPA
116
LLPS-Maf-3080
ENSMFAG00000000752.1
G7PU91
SPOP
117
LLPS-Maf-2816
ENSMFAG00000041784.1
G7NWV7
SRSF4
118
LLPS-Maf-2497
ENSMFAG00000038679.1
G7PMA3
XPO1
119
LLPS-Maf-0768
ENSMFAG00000046336.1
G7P7G1
ZNF131