Fusarium solani      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 32 genes.  Reviewed (0 or Unreviewed (32

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Fus-0435
NechaG100028
C7YQ28
NECHADRAFT_100028
2
LLPS-Fus-0750
NechaG100222
C7YNR4
NECHADRAFT_100222
3
LLPS-Fus-0374
NechaG104111
C7YQF0
NECHADRAFT_104111
4
LLPS-Fus-0470
NechaG25841
C7YNK9
NECHADRAFT_25841
5
LLPS-Fus-0514
NechaG30656
C7YKC4
NECHADRAFT_30656
6
LLPS-Fus-0081
NechaG33762
C7Z4Y9
NECHADRAFT_33762
7
LLPS-Fus-1014
NechaG34449
C7ZCF5
NECHADRAFT_34449
8
LLPS-Fus-0652
NechaG38412
C7YQ26
NECHADRAFT_38412
9
LLPS-Fus-1443
NechaG40692
C7YR42
NECHADRAFT_40692
10
LLPS-Fus-0582
NechaG41503
C7YRX6
NECHADRAFT_41503
11
LLPS-Fus-0202
NechaG43203
C7Z9T6
NECHADRAFT_43203
12
LLPS-Fus-0287
NechaG47249
C7YZ53
NECHADRAFT_47249
13
LLPS-Fus-1484
NechaG5326
C7YQ27
NECHADRAFT_5326
14
LLPS-Fus-1222
NechaG63411
C7YTK4
NECHADRAFT_63411
15
LLPS-Fus-1384
NechaG63983
C7ZPG6
NECHADRAFT_63983
16
LLPS-Fus-0577
NechaG65387
C7YK00
NECHADRAFT_65387
17
LLPS-Fus-0137
NechaG67723
C7YNE7
NECHADRAFT_67723
18
LLPS-Fus-0463
NechaG68989
C7Z0R9
NECHADRAFT_68989
19
LLPS-Fus-0256
NechaG70215
C7Z8X9
NECHADRAFT_70215
20
LLPS-Fus-0132
NechaG71824
C7YU09
NECHADRAFT_71824
21
LLPS-Fus-0119
NechaG72372
C7Z1I5
NECHADRAFT_72372
22
LLPS-Fus-0273
NechaG74731
C7YGT2
NECHADRAFT_74731
23
LLPS-Fus-0371
NechaG74839
C7YH41
NECHADRAFT_74839
24
LLPS-Fus-0936
NechaG76500
C7Z4F2
NECHADRAFT_76500
25
LLPS-Fus-0296
NechaG77914
C7YML0
NECHADRAFT_77914
26
LLPS-Fus-0438
NechaG80338
C7YRC0
NECHADRAFT_80338
27
LLPS-Fus-1030
NechaG90073
C7YGZ4
NECHADRAFT_90073
28
LLPS-Fus-1596
NechaG92026
C7YMM2
NECHADRAFT_92026
29
LLPS-Fus-0149
NechaG94621
C7ZA28
NECHADRAFT_94621
30
LLPS-Fus-0145
NechaG96435
C7YV25
NECHADRAFT_96435
31
LLPS-Fus-0692
NechaG98714
C7YKE5
NECHADRAFT_98714
32
LLPS-Fus-0715
NechaG98811
C7YH58
NECHADRAFT_98811