Aotus nancymaae      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 117 genes.  Reviewed (0 or Unreviewed (117

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Aon-0101
ENSANAG00000020852.1
A0A2K5CAI8
2
LLPS-Aon-0106
ENSANAG00000035825.1
A0A2K5EU02
3
LLPS-Aon-0231
ENSANAG00000038315.1
A0A2K5F9I4
4
LLPS-Aon-0280
ENSANAG00000036387.1
A0A2K5EX66
5
LLPS-Aon-0342
ENSANAG00000034973.1
A0A2K5ENY4
6
LLPS-Aon-0384
ENSANAG00000026989.1
A0A2K5DBH8
7
LLPS-Aon-0462
ENSANAG00000018690.1
A0A2K5C1L7
8
LLPS-Aon-0483
ENSANAG00000021786.1
A0A2K5CFI4
9
LLPS-Aon-0646
ENSANAG00000033233.1
A0A2K5ECL5
10
LLPS-Aon-0661
ENSANAG00000024540.1
A0A2K5CX83
11
LLPS-Aon-0876
ENSANAG00000027405.1
A0A2K5DE30
12
LLPS-Aon-1016
ENSANAG00000027438.1
A0A2K5DEB4
13
LLPS-Aon-1081
ENSANAG00000020583.1
A0A2K5C8M5
14
LLPS-Aon-1128
ENSANAG00000007295.1
A0A2K5BWU5
15
LLPS-Aon-1734
ENSANAG00000034820.1
A0A2K5EMI2
16
LLPS-Aon-1870
ENSANAG00000026664.1
A0A2K5D9U2
17
LLPS-Aon-2002
ENSANAG00000026131.1
A0A2K5D6E0
18
LLPS-Aon-2022
ENSANAG00000021591.1
A0A2K5CEH5
19
LLPS-Aon-2092
ENSANAG00000023645.1
A0A2K5CRR6
20
LLPS-Aon-2578
ENSANAG00000033266.1
A0A2K5ED14
21
LLPS-Aon-3164
ENSANAG00000021098.1
A0A2K5CCU1
22
LLPS-Aon-3169
ENSANAG00000033790.1
A0A2K5EG79
23
LLPS-Aon-3383
ENSANAG00000021576.1
A0A2K5CEA5
24
LLPS-Aon-3421
ENSANAG00000033337.1
A0A2K5EDI1
25
LLPS-Aon-3549
ENSANAG00000038471.1
A0A2K5FA50
26
LLPS-Aon-4351
ENSANAG00000028229.1
A0A2K5DIT7
27
LLPS-Aon-1901
ENSANAG00000027399.1
A0A2K5DE74
AGO2
28
LLPS-Aon-3938
ENSANAG00000025759.1
A0A2K5D479
AKAP17A
29
LLPS-Aon-0041
ENSANAG00000032501.1
A0A2K5E867
ANXA10
30
LLPS-Aon-1413
ENSANAG00000023201.1
A0A2K5CNY9
ANXA2
31
LLPS-Aon-0581
ENSANAG00000035845.1
A0A2K5ETY9
ARL6IP4
32
LLPS-Aon-0237
ENSANAG00000025376.1
A0A2K5D241
ATR
33
LLPS-Aon-1617
ENSANAG00000031046.1
A0A2K5E0F7
BCAS2
34
LLPS-Aon-4203
ENSANAG00000037186.1
A0A2K5F291
C9orf78
35
LLPS-Aon-0730
ENSANAG00000027252.1
A0A2K5DD58
CARM1
36
LLPS-Aon-3233
ENSANAG00000035618.1
A0A2K5ESS2
CCNL1
37
LLPS-Aon-1863
ENSANAG00000028499.1
A0A2K5DKW5
CDC5L
38
LLPS-Aon-2322
ENSANAG00000028695.1
A0A2K5DLZ9
CDK7
39
LLPS-Aon-4726
ENSANAG00000034696.1
A0A2K5ELV4
CDKL5
40
LLPS-Aon-3557
ENSANAG00000020761.1
A0A2K5CA12
COP1
41
LLPS-Aon-3364
ENSANAG00000028655.1
A0A2K5DLP6
CTNNBL1
42
LLPS-Aon-0264
ENSANAG00000030372.1
A0A2K5DWU2
DDX39B
43
LLPS-Aon-2770
ENSANAG00000032116.1
A0A2K5E6W2
DDX46
44
LLPS-Aon-0950
ENSANAG00000013710.1
A0A2K5BZ17
DGCR8
45
LLPS-Aon-0889
ENSANAG00000031367.1
A0A2K5E1Q2
DNAJB1
46
LLPS-Aon-1944
ENSANAG00000035937.1
A0A2K5EUQ5
DNAJC17
47
LLPS-Aon-1510
ENSANAG00000037904.1
A0A2K5F6R1
DYRK3
48
LLPS-Aon-4609
ENSANAG00000027983.1
A0A2K5DHK8
EGF
49
LLPS-Aon-0338
ENSANAG00000024622.1
A0A2K5CXK3
ERH
50
LLPS-Aon-3712
ENSANAG00000030187.1
A0A2K5DWA1
EZH1
51
LLPS-Aon-1251
ENSANAG00000027519.1
A0A2K5DES5
FAM76B
52
LLPS-Aon-4682
ENSANAG00000035999.1
A0A2K5EUW7
FAM83H
53
LLPS-Aon-1592
ENSANAG00000037438.1
A0A2K5F439
FANCD2
54
LLPS-Aon-3337
ENSANAG00000035719.1
A0A2K5ETC4
FANCI
55
LLPS-Aon-2143
ENSANAG00000028997.1
A0A2K5DNC3
FBXL18
56
LLPS-Aon-3734
ENSANAG00000031431.1
A0A2K5E1U1
FRMD8
57
LLPS-Aon-1878
ENSANAG00000024581.1
A0A2K5CXE5
FYTTD1
58
LLPS-Aon-1268
ENSANAG00000033410.1
A0A2K5EDQ6
GLI3
59
LLPS-Aon-0599
ENSANAG00000026215.1
A0A2K5D775
GSK3B
60
LLPS-Aon-0314
ENSANAG00000014779.1
A0A2K5C0J1
HIF1A
61
LLPS-Aon-0547
ENSANAG00000036285.1
A0A2K5EWY1
HIF3A
62
LLPS-Aon-0861
ENSANAG00000020026.1
A0A2K5C6Q1
HIPK2
63
LLPS-Aon-0005
ENSANAG00000033016.1
A0A2K5EBJ8
HNRNPA2B1
64
LLPS-Aon-3252
ENSANAG00000030728.1
A0A2K5E076
HNRNPK
65
LLPS-Aon-1101
ENSANAG00000021833.1
A0A2K5CFY3
HSPH1
66
LLPS-Aon-0201
ENSANAG00000026889.1
A0A2K5DAU0
ILF3
67
LLPS-Aon-1623
ENSANAG00000027603.1
A0A2K5DFC7
IVNS1ABP
68
LLPS-Aon-3518
ENSANAG00000026226.1
A0A2K5D6Z1
MAGOH
69
LLPS-Aon-1207
ENSANAG00000029222.1
A0A2K5DQ48
NAGK
70
LLPS-Aon-0686
ENSANAG00000038130.1
A0A2K5F8A3
NKAP
71
LLPS-Aon-2966
ENSANAG00000027136.1
A0A2K5DCH4
NR5A1
72
LLPS-Aon-0492
ENSANAG00000036718.1
A0A2K5EZE1
NSRP1
73
LLPS-Aon-0072
ENSANAG00000023561.1
A0A2K5CR79
NUAK2
74
LLPS-Aon-1619
ENSANAG00000024600.1
A0A2K5CXJ9
NXF1
75
LLPS-Aon-0862
ENSANAG00000037964.1
A0A2K5F7A3
OGG1
76
LLPS-Aon-4563
ENSANAG00000018631.1
A0A2K5C1E0
P2RY12
77
LLPS-Aon-3005
ENSANAG00000036805.1
A0A2K5F065
PLRG1
78
LLPS-Aon-0824
ENSANAG00000029815.1
A0A2K5DTD0
PNN
79
LLPS-Aon-3003
ENSANAG00000020357.1
A0A2K5C7I6
PPIG
80
LLPS-Aon-3189
ENSANAG00000021762.1
A0A2K5CFW4
PRPF19
81
LLPS-Aon-1077
ENSANAG00000032629.1
A0A2K5EA19
PRPF8
82
LLPS-Aon-0926
ENSANAG00000034210.1
A0A2K5EIP1
PSMA3
83
LLPS-Aon-0645
ENSANAG00000000059.1
A0A2K5BUH6
PSPC1
84
LLPS-Aon-4119
ENSANAG00000030130.1
A0A2K5DVN7
RAPGEF1
85
LLPS-Aon-1073
ENSANAG00000030127.1
A0A2K5DVJ4
RBM17
86
LLPS-Aon-0415
ENSANAG00000032814.1
A0A2K5EA57
RBMX2
87
LLPS-Aon-3870
ENSANAG00000026490.1
A0A2K5D8I1
RNF151
88
LLPS-Aon-0269
ENSANAG00000028802.1
A0A2K5DM98
RNPS1
89
LLPS-Aon-0955
ENSANAG00000032045.1
A0A2K5E5M0
SF3A1
90
LLPS-Aon-1085
ENSANAG00000014878.1
A0A2K5BZ50
SF3A3
91
LLPS-Aon-3284
ENSANAG00000021577.1
A0A2K5CEP3
SF3B1
92
LLPS-Aon-0878
ENSANAG00000001462.1
A0A2K5BUU7
SMAD3
93
LLPS-Aon-1688
ENSANAG00000036625.1
A0A2K5EZS9
SNRNP200
94
LLPS-Aon-4481
ENSANAG00000025109.1
A0A2K5D0B4
SNRNP35
95
LLPS-Aon-1066
ENSANAG00000036787.1
A0A2K5EZU8
SNRNP70
96
LLPS-Aon-0095
ENSANAG00000038354.1
A0A2K5F9R3
SNRPA1
97
LLPS-Aon-3973
ENSANAG00000022548.1
A0A2K5CK16
SNRPB2
98
LLPS-Aon-0507
ENSANAG00000035426.1
A0A2K5ERK1
SON
99
LLPS-Aon-4430
ENSANAG00000025648.1
A0A2K5D3N0
SPOP
100
LLPS-Aon-1209
ENSANAG00000034911.1
A0A2K5EN68
SRRM2
101
LLPS-Aon-0004
ENSANAG00000004226.1
A0A2K5BVL8
SRSF2
102
LLPS-Aon-1357
ENSANAG00000037134.1
A0A2K5F1V9
SRSF4
103
LLPS-Aon-3304
ENSANAG00000019399.1
A0A2K5C2W7
SRSF7
104
LLPS-Aon-0789
ENSANAG00000035910.1
A0A2K5EUB9
SRSF9
105
LLPS-Aon-2411
ENSANAG00000035843.1
A0A2K5EV85
STAT3
106
LLPS-Aon-1840
ENSANAG00000033069.1
A0A2K5EBY3
SUMO1
107
LLPS-Aon-4365
ENSANAG00000025374.1
A0A2K5D1Z2
TAP1
108
LLPS-Aon-1173
ENSANAG00000023704.1
A0A2K5CSA5
TGFBR1
109
LLPS-Aon-1262
ENSANAG00000022734.1
A0A2K5CLD7
TRA2B
110
LLPS-Aon-3445
ENSANAG00000028203.1
A0A2K5DIR5
TTC14
111
LLPS-Aon-1109
ENSANAG00000028042.1
A0A2K5DHW2
U2AF2
112
LLPS-Aon-1020
ENSANAG00000035774.1
A0A2K5EV59
U2SURP
113
LLPS-Aon-1459
ENSANAG00000020802.1
A0A2K5CAE7
XPO1
114
LLPS-Aon-1991
ENSANAG00000001522.1
A0A2K5BV64
YTHDC1
115
LLPS-Aon-3692
ENSANAG00000034448.1
A0A2K5EK53
ZNF106
116
LLPS-Aon-2577
ENSANAG00000021961.1
A0A2K5CGU5
ZNF131
117
LLPS-Aon-1164
ENSANAG00000025853.1
A0A2K5D4T3
ZNF688