Yarrowia lipolytica      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 31 genes.  Reviewed (0 or Unreviewed (31

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Yal-1440
YALI0_B00704g
Q6CG57
ADK1
2
LLPS-Yal-1282
YALI0_F03432g
Q6C315
ATG13
3
LLPS-Yal-0148
YALI0_F21032g
Q6C0X2
DHH1
4
LLPS-Yal-0048
YALI0_E34375g
Q6C3J2
IPL1
5
LLPS-Yal-0460
YALI0_A19756g
Q6CGF6
LSM4
6
LLPS-Yal-0100
YALI0_C00539g
Q6CDH3
PAB1
7
LLPS-Yal-1059
YALI0_F09185g
P30614
PYK1
8
LLPS-Yal-0689
YALI0_B02706g
Q6CFX8
YALI0_B02706g
9
LLPS-Yal-0239
YALI0_B08250g
Q6CFC9
YALI0_B08250g
10
LLPS-Yal-0257
YALI0_B23232g
Q6CDK5
YALI0_B23232g
11
LLPS-Yal-0095
YALI0_B23298g
Q6CDK2
YALI0_B23298g
12
LLPS-Yal-0146
YALI0_C04620g
Q6CD12
YALI0_C04620g
13
LLPS-Yal-0783
YALI0_C07040g
Q6CCS0
YALI0_C07040g
14
LLPS-Yal-0305
YALI0_C13310g
Q6CC24
YALI0_C13310g
15
LLPS-Yal-0166
YALI0_C15873g
Q6CBS8
YALI0_C15873g
16
LLPS-Yal-0050
YALI0_C16566g
Q6CBQ3
YALI0_C16566g
17
LLPS-Yal-0169
YALI0_C24057g
Q6CAV4
YALI0_C24057g
18
LLPS-Yal-0727
YALI0_D02101g
Q6CAK0
YALI0_D02101g
19
LLPS-Yal-0525
YALI0_D04334g
Q6CAB2
YALI0_D04334g
20
LLPS-Yal-1288
YALI0_D10131g
Q6C9L5
YALI0_D10131g
21
LLPS-Yal-0324
YALI0_D12144g
Q6C9D2
YALI0_D12144g
22
LLPS-Yal-0415
YALI0_D14410g
Q6C942
YALI0_D14410g
23
LLPS-Yal-0319
YALI0_D17886g
Q6C8Q2
YALI0_D17886g
24
LLPS-Yal-0426
YALI0_E09174g
Q6C6I9
YALI0_E09174g
25
LLPS-Yal-0916
YALI0_E19514g
Q6C5B3
YALI0_E19514g
26
LLPS-Yal-0227
YALI0_E22352g
Q6C4Z8
YALI0_E22352g
27
LLPS-Yal-0063
YALI0_F01793g
Q6C386
YALI0_F01793g
28
LLPS-Yal-1381
YALI0_F10098g
Q6C278
YALI0_F10098g
29
LLPS-Yal-0004
YALI0_F14575g
Q6C1P3
YALI0_F14575g
30
LLPS-Yal-0303
YALI0_F14707g
Q6C1N7
YALI0_F14707g
31
LLPS-Yal-0983
YALI0_F25531g
Q6C0E1
YALI0_F25531g