Tuber melanosporum      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 37 genes.  Reviewed (0 or Unreviewed (37

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Tum-0318
GSTUM_00000091001
D5G4P5
GSTUM_00000091001
2
LLPS-Tum-0162
GSTUM_00000140001
D5G4X7
GSTUM_00000140001
3
LLPS-Tum-0296
GSTUM_00000464001
D5GBG6
GSTUM_00000464001
4
LLPS-Tum-1330
GSTUM_00002997001
D5G8L2
GSTUM_00002997001
5
LLPS-Tum-1120
GSTUM_00003688001
D5GAM8
GSTUM_00003688001
6
LLPS-Tum-0588
GSTUM_00004234001
D5G595
GSTUM_00004234001
7
LLPS-Tum-1013
GSTUM_00004418001
D5G6C1
GSTUM_00004418001
8
LLPS-Tum-1170
GSTUM_00004755001
D5G8D1
GSTUM_00004755001
9
LLPS-Tum-0069
GSTUM_00004863001
D5G8W0
GSTUM_00004863001
10
LLPS-Tum-0410
GSTUM_00005162001
D5GA69
GSTUM_00005162001
11
LLPS-Tum-0500
GSTUM_00005244001
D5GAD3
GSTUM_00005244001
12
LLPS-Tum-1101
GSTUM_00005658001
D5GBJ2
GSTUM_00005658001
13
LLPS-Tum-0917
GSTUM_00006321001
D5GDX3
GSTUM_00006321001
14
LLPS-Tum-0175
GSTUM_00006552001
D5GEL6
GSTUM_00006552001
15
LLPS-Tum-0900
GSTUM_00006992001
D5GFN0
GSTUM_00006992001
16
LLPS-Tum-0883
GSTUM_00007009001
D5GFQ6
GSTUM_00007009001
17
LLPS-Tum-0010
GSTUM_00007501001
D5GGT2
GSTUM_00007501001
18
LLPS-Tum-0218
GSTUM_00008059001
D5GHN5
GSTUM_00008059001
19
LLPS-Tum-0618
GSTUM_00008343001
D5GI89
GSTUM_00008343001
20
LLPS-Tum-0352
GSTUM_00008723001
D5GIX1
GSTUM_00008723001
21
LLPS-Tum-0252
GSTUM_00009086001
D5GJN4
GSTUM_00009086001
22
LLPS-Tum-0155
GSTUM_00009366001
D5GK52
GSTUM_00009366001
23
LLPS-Tum-1472
GSTUM_00009643001
D5GKM5
GSTUM_00009643001
24
LLPS-Tum-0140
GSTUM_00009762001
D5GKT6
GSTUM_00009762001
25
LLPS-Tum-0187
GSTUM_00010106001
D5GLA8
GSTUM_00010106001
26
LLPS-Tum-0874
GSTUM_00010135001
D5GLC9
GSTUM_00010135001
27
LLPS-Tum-1027
GSTUM_00010616001
D5GM98
GSTUM_00010616001
28
LLPS-Tum-0639
GSTUM_00010629001
D5GMA9
GSTUM_00010629001
29
LLPS-Tum-1307
GSTUM_00010739001
D5GMI2
GSTUM_00010739001
30
LLPS-Tum-0088
GSTUM_00010952001
D5GMV5
GSTUM_00010952001
31
LLPS-Tum-0229
GSTUM_00011210001
D5GNB6
GSTUM_00011210001
32
LLPS-Tum-1226
GSTUM_00011380001
D5GNM8
GSTUM_00011380001
33
LLPS-Tum-0211
GSTUM_00011602001
D5GNZ9
GSTUM_00011602001
34
LLPS-Tum-0031
GSTUM_00011755001
D5GP89
GSTUM_00011755001
35
LLPS-Tum-0518
GSTUM_00011839001
D5GPG7
GSTUM_00011839001
36
LLPS-Tum-1358
GSTUM_00012006001
D5GPS4
GSTUM_00012006001
37
LLPS-Tum-0295
GSTUM_00005366001
D5GAZ0
LSM4