Sus scrofa      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 110 genes.  Reviewed (0 or Unreviewed (110

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sus-2235
ENSSSCG00000036878.1
A0A286ZUP7
2
LLPS-Sus-0984
ENSSSCG00000005935.3
A0A287B5S7
AGO2
3
LLPS-Sus-4451
ENSSSCG00000032067.1
A0A287AH85
AK2
4
LLPS-Sus-1763
ENSSSCG00000012022.3
P79307
APP
5
LLPS-Sus-2301
ENSSSCG00000009834.3
A0A286ZI01
ATXN2
6
LLPS-Sus-0282
ENSSSCG00000021845.2
A0A287AV57
ATXN2L
7
LLPS-Sus-2126
ENSSSCG00000007493.4
A5GFW1
AURKA
8
LLPS-Sus-1847
ENSSSCG00000028924.2
I3LFX5
AURKB
9
LLPS-Sus-3662
ENSSSCG00000011010.3
A0A287AZU9
C9orf72
10
LLPS-Sus-3660
ENSSSCG00000010311.3
A0A286ZKT1
CAMK2G
11
LLPS-Sus-1468
ENSSSCG00000017529.3
F1RWH1
CBX1
12
LLPS-Sus-0148
ENSSSCG00000024261.2
I3LU16
CBX2
13
LLPS-Sus-1648
ENSSSCG00000039191.1
F2Z5T3
CBX5
14
LLPS-Sus-1743
ENSSSCG00000038181.1
A0A286ZQB6
CCNT1
15
LLPS-Sus-2344
ENSSSCG00000016961.3
C9K505
CDK7
16
LLPS-Sus-0302
ENSSSCG00000005621.3
C9E1C9
CDK9
17
LLPS-Sus-3389
ENSSSCG00000013427.3
A0A286ZNG8
CIRBP
18
LLPS-Sus-1834
ENSSSCG00000038410.1
A0A288CFW3
CPEB2
19
LLPS-Sus-3261
ENSSSCG00000012486.4
I3LE23
CSTF2
20
LLPS-Sus-3070
ENSSSCG00000010430.3
F1SD01
CSTF2T
21
LLPS-Sus-1466
ENSSSCG00000031769.1
A0A287BKR0
CTTN
22
LLPS-Sus-4214
ENSSSCG00000005524.3
A0A287AFX0
DAB2IP
23
LLPS-Sus-0794
ENSSSCG00000001509.3
F1RZS8
DAXX
24
LLPS-Sus-3359
ENSSSCG00000022528.2
I3LB68
DAZAP1
25
LLPS-Sus-1163
ENSSSCG00000023976.2
I3LE95
DCP1B
26
LLPS-Sus-1492
ENSSSCG00000014204.3
A0A287BGM6
DCP2
27
LLPS-Sus-0243
ENSSSCG00000012252.3
F1RX16
DDX3X
28
LLPS-Sus-1579
ENSSSCG00000016913.3
F1SLL4
DDX4
29
LLPS-Sus-1007
ENSSSCG00000015097.3
F1SAJ5
DDX6
30
LLPS-Sus-2253
ENSSSCG00000024285.2
I3LMS7
DLG4
31
LLPS-Sus-1558
ENSSSCG00000003690.3
A0A287B2P3
DLGAP1
32
LLPS-Sus-4545
ENSSSCG00000030480.2
I3L9V1
DYRK1A
33
LLPS-Sus-1781
ENSSSCG00000001903.3
F1SIE7
EDC3
34
LLPS-Sus-2923
ENSSSCG00000003512.3
A0A287AF76
EIF4G3
35
LLPS-Sus-2624
ENSSSCG00000006099.3
A0A286ZV42
ESRP1
36
LLPS-Sus-3401
ENSSSCG00000009974.3
A0A287APW0
EWSR1
37
LLPS-Sus-2561
ENSSSCG00000017013.3
F1RR91
FBLL1
38
LLPS-Sus-1217
ENSSSCG00000033299.1
A0A287A4W0
FLNA
39
LLPS-Sus-3591
ENSSSCG00000011471.3
A0A287BLE0
FLNB
40
LLPS-Sus-2044
ENSSSCG00000012727.4
K7GSF4
FMR1
41
LLPS-Sus-0675
ENSSSCG00000030798.2
A0A287BPC6
FUS
42
LLPS-Sus-2865
ENSSSCG00000004421.4
A1Y2K1
FYN
43
LLPS-Sus-1588
ENSSSCG00000009137.3
I3LVQ6
GAR1
44
LLPS-Sus-0968
ENSSSCG00000031631.1
A0A287AKR9
GNL2
45
LLPS-Sus-0356
ENSSSCG00000017206.4
B6E241
GRB2
46
LLPS-Sus-3967
ENSSSCG00000021118.2
I3LNK5
GSPT1
47
LLPS-Sus-3475
ENSSSCG00000000288.3
A0A286ZPE3
HNRNPA1
48
LLPS-Sus-2441
ENSSSCG00000036350.1
A0A286ZI52
HNRNPA2B1
49
LLPS-Sus-0964
ENSSSCG00000009249.3
F1RVC9
HNRNPD
50
LLPS-Sus-0207
ENSSSCG00000037245.1
A0A287B2L4
HNRNPDL
51
LLPS-Sus-1517
ENSSSCG00000014022.3
A0A287BL05
HNRNPH1
52
LLPS-Sus-3361
ENSSSCG00000033161.1
A0A286ZWW2
HNRNPH2
53
LLPS-Sus-4296
ENSSSCG00000010238.3
F2Z5W4
HNRNPH3
54
LLPS-Sus-1309
ENSSSCG00000013919.3
F1S8D2
HOMER3
55
LLPS-Sus-1182
ENSSSCG00000009509.3
F1RP44
IPO5
56
LLPS-Sus-2852
ENSSSCG00000024614.2
A0A287A536
ITSN1
57
LLPS-Sus-2201
ENSSSCG00000029005.2
I3LS70
KPNA2
58
LLPS-Sus-0099
ENSSSCG00000017514.3
F1RWJ5
KPNB1
59
LLPS-Sus-1484
ENSSSCG00000007811.4
K7GT47
LAT
60
LLPS-Sus-1782
ENSSSCG00000032397.1
M3VH35
LBR
61
LLPS-Sus-2697
ENSSSCG00000005055.4
K7GRV5
LGALS3
62
LLPS-Sus-4541
ENSSSCG00000000194.3
F1SHC1
LOC100127131
63
LLPS-Sus-0811
ENSSSCG00000034314.1
A0A287AKQ5
LSM4
64
LLPS-Sus-0797
ENSSSCG00000000492.4
A0A2C9F343
LYZ
65
LLPS-Sus-3088
ENSSSCG00000007281.3
D2KQR0
MAP1LC3A
66
LLPS-Sus-1201
ENSSSCG00000002655.3
A0A287B8I0
MAP1LC3B
67
LLPS-Sus-4419
ENSSSCG00000017311.3
A0A286ZXV0
MAPT
68
LLPS-Sus-3985
ENSSSCG00000030211.2
A0A287A9L9
NBR1
69
LLPS-Sus-3015
ENSSSCG00000025701.2
A0A287BMS5
NCK1
70
LLPS-Sus-3133
ENSSSCG00000029284.2
A0A286ZZA9
NPHS1
71
LLPS-Sus-3091
ENSSSCG00000016998.3
F1RRY2
NPM1
72
LLPS-Sus-1347
ENSSSCG00000026034.2
I3LEL0
NUP153
73
LLPS-Sus-0036
ENSSSCG00000040333.1
A0A287AZ57
NUP62
74
LLPS-Sus-0082
ENSSSCG00000014794.3
F1SUZ2
NUP98
75
LLPS-Sus-1508
ENSSSCG00000006063.3
F2Z557
PABPC1
76
LLPS-Sus-3324
ENSSSCG00000001930.3
A0A287B8G0
PKM
77
LLPS-Sus-2279
ENSSSCG00000026748.2
I3LII4
PLK1
78
LLPS-Sus-4826
ENSSSCG00000013572.3
A0A286ZW95
PNPLA6
79
LLPS-Sus-0402
ENSSSCG00000028278.2
I3LJR4
POLR2A
80
LLPS-Sus-2025
ENSSSCG00000036145.1
Q28948
PRKAA2
81
LLPS-Sus-0060
ENSSSCG00000003189.3
F1RHU6
PRMT1
82
LLPS-Sus-0940
ENSSSCG00000009569.3
A0A286ZKW2
PSPC1
83
LLPS-Sus-1420
ENSSSCG00000013421.3
A0A286ZKQ3
PTBP1
84
LLPS-Sus-0868
ENSSSCG00000017475.3
F1RXC9
RARA
85
LLPS-Sus-3601
ENSSSCG00000007917.3
A0A287BS62
RBFOX1
86
LLPS-Sus-1096
ENSSSCG00000038008.1
A0A287B401
RBM14
87
LLPS-Sus-0740
ENSSSCG00000021591.2
I3L5X7
RBM3
88
LLPS-Sus-2094
ENSSSCG00000035080.1
A0A286ZL51
RPL23A
89
LLPS-Sus-1496
ENSSSCG00000006899.3
A0A287ASD0
RPL5
90
LLPS-Sus-3880
ENSSSCG00000011207.3
F1RS59
SGO1
91
LLPS-Sus-0698
ENSSSCG00000031925.1
A0A287BEU5
SHANK3
92
LLPS-Sus-0981
ENSSSCG00000008478.3
F1S4T0
SOS1
93
LLPS-Sus-0262
ENSSSCG00000014016.3
F1S445
SQSTM1
94
LLPS-Sus-0683
ENSSSCG00000032106.1
A0A287B433
SURF6
95
LLPS-Sus-2950
ENSSSCG00000012276.3
B7TY10
SYN1
96
LLPS-Sus-2435
ENSSSCG00000023225.2
A0A287ALW8
SYN2
97
LLPS-Sus-2925
ENSSSCG00000001513.3
A0A287BNM2
SYNGAP1
98
LLPS-Sus-2766
ENSSSCG00000017707.3
F1S187
TAF15
99
LLPS-Sus-0261
ENSSSCG00000023126.2
I3LNA4
TARDBP
100
LLPS-Sus-0370
ENSSSCG00000023409.2
A0A287A0R0
TIA1
101
LLPS-Sus-0029
ENSSSCG00000010685.3
F2Z5F9
TIAL1
102
LLPS-Sus-0168
ENSSSCG00000027293.2
I3LM93
TNPO1
103
LLPS-Sus-4322
ENSSSCG00000000078.3
A0A287BNM0
TNRC6B
104
LLPS-Sus-0826
ENSSSCG00000017950.3
Q9TUB2
TP53
105
LLPS-Sus-4069
ENSSSCG00000035264.1
A0A286ZWA5
UBQLN2
106
LLPS-Sus-3735
ENSSSCG00000013510.3
F1S7L6
UBXN6
107
LLPS-Sus-4017
ENSSSCG00000015843.3
F1RX67
UBXN8
108
LLPS-Sus-3558
ENSSSCG00000016604.3
F1SMK2
WASL
109
LLPS-Sus-0947
ENSSSCG00000028228.2
A0A287BHC9
XPO1
110
LLPS-Sus-3899
ENSSSCG00000017732.3
A0A287AD24
ZNF207