Sorghum bicolor      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sob-1247
SORBI_3003G117300
C5XFV4
LSM4
2
LLPS-Sob-0636
SORBI_3001G021800
C5WTX4
SORBI_3001G021800
3
LLPS-Sob-1164
SORBI_3001G049500
A0A1B6QHD4
SORBI_3001G049500
4
LLPS-Sob-0973
SORBI_3001G201400
C5WWE1
SORBI_3001G201400
5
LLPS-Sob-1592
SORBI_3001G371000
C5WZS4
SORBI_3001G371000
6
LLPS-Sob-0104
SORBI_3001G386900
C5X1R1
SORBI_3001G386900
7
LLPS-Sob-0048
SORBI_3001G488100
C5WVX6
SORBI_3001G488100
8
LLPS-Sob-0885
SORBI_3002G114900
C5X4C5
SORBI_3002G114900
9
LLPS-Sob-1791
SORBI_3002G196350
A0A1W0W4Y1
SORBI_3002G196350
10
LLPS-Sob-0418
SORBI_3002G297200
C5X8E5
SORBI_3002G297200
11
LLPS-Sob-0185
SORBI_3002G350600
C5XCD3
SORBI_3002G350600
12
LLPS-Sob-1500
SORBI_3003G034600
C5XLY9
SORBI_3003G034600
13
LLPS-Sob-2008
SORBI_3003G058900
A0A1B6Q1J6
SORBI_3003G058900
14
LLPS-Sob-1462
SORBI_3003G233500
C5XEJ6
SORBI_3003G233500
15
LLPS-Sob-0678
SORBI_3003G361400
A0A1B6Q718
SORBI_3003G361400
16
LLPS-Sob-0638
SORBI_3003G387900
A0A1B6Q7J3
SORBI_3003G387900
17
LLPS-Sob-1296
SORBI_3004G146500
A0A1Z5RNJ3
SORBI_3004G146500
18
LLPS-Sob-0566
SORBI_3004G349700
C5XW06
SORBI_3004G349700
19
LLPS-Sob-1698
SORBI_3005G042000
C5Y519
SORBI_3005G042000
20
LLPS-Sob-1640
SORBI_3005G059800
A0A1B6PQE2
SORBI_3005G059800
21
LLPS-Sob-0923
SORBI_3005G131800
C5Y385
SORBI_3005G131800
22
LLPS-Sob-0578
SORBI_3005G164700
C5Y4Z6
SORBI_3005G164700
23
LLPS-Sob-0481
SORBI_3006G034500
C5YDD4
SORBI_3006G034500
24
LLPS-Sob-1476
SORBI_3006G126900
C5YAX6
SORBI_3006G126900
25
LLPS-Sob-0151
SORBI_3006G137100
A0A1B6PLV6
SORBI_3006G137100
26
LLPS-Sob-0967
SORBI_3006G139100
C5YBU9
SORBI_3006G139100
27
LLPS-Sob-1271
SORBI_3006G164800
A0A1B6PMC3
SORBI_3006G164800
28
LLPS-Sob-1364
SORBI_3006G280000
C5YB46
SORBI_3006G280000
29
LLPS-Sob-0345
SORBI_3007G091600
C5YJK9
SORBI_3007G091600
30
LLPS-Sob-1812
SORBI_3007G203200
C5YIB3
SORBI_3007G203200
31
LLPS-Sob-0829
SORBI_3008G103900
C5YNX7
SORBI_3008G103900
32
LLPS-Sob-0631
SORBI_3008G135200
C5YPY1
SORBI_3008G135200
33
LLPS-Sob-1547
SORBI_3009G126600
C5YXJ4
SORBI_3009G126600
34
LLPS-Sob-2229
SORBI_3009G208100
C5Z1H4
SORBI_3009G208100
35
LLPS-Sob-0834
SORBI_3009G246950
A0A1Z5R404
SORBI_3009G246950
36
LLPS-Sob-1299
SORBI_3010G239800
C5Z8E1
SORBI_3010G239800