Pyrenophora teres      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Pyt-0219
PTT_08690
E3RKD4
ADK1
2
LLPS-Pyt-0640
PTT_19864
E3S9W7
LSM4
3
LLPS-Pyt-0636
PTT_01528
E3RD32
PTT_01528
4
LLPS-Pyt-0657
PTT_01851
E3RDA0
PTT_01851
5
LLPS-Pyt-1611
PTT_04681
E3REL3
PTT_04681
6
LLPS-Pyt-1635
PTT_06663
E3RFY2
PTT_06663
7
LLPS-Pyt-0863
PTT_06717
E3RG25
PTT_06717
8
LLPS-Pyt-0733
PTT_08457
E3RJU6
PTT_08457
9
LLPS-Pyt-0737
PTT_08858
E3RKR8
PTT_08858
10
LLPS-Pyt-0049
PTT_09448
E3RM16
PTT_09448
11
LLPS-Pyt-1153
PTT_10092
E3RNF2
PTT_10092
12
LLPS-Pyt-0488
PTT_10137
E3RNI7
PTT_10137
13
LLPS-Pyt-0638
PTT_10181
E3RNM6
PTT_10181
14
LLPS-Pyt-0316
PTT_10748
E3RPZ2
PTT_10748
15
LLPS-Pyt-0979
PTT_10767
E3RQ09
PTT_10767
16
LLPS-Pyt-1191
PTT_10846
E3RQ82
PTT_10846
17
LLPS-Pyt-0697
PTT_10882
E3RQA5
PTT_10882
18
LLPS-Pyt-0386
PTT_11145
E3RQV5
PTT_11145
19
LLPS-Pyt-0217
PTT_11361
E3RRD8
PTT_11361
20
LLPS-Pyt-0104
PTT_11683
E3RS31
PTT_11683
21
LLPS-Pyt-0615
PTT_13820
E3RWW6
PTT_13820
22
LLPS-Pyt-1100
PTT_14132
E3RXK3
PTT_14132
23
LLPS-Pyt-0553
PTT_15249
E3RZU4
PTT_15249
24
LLPS-Pyt-0186
PTT_15561
E3S0I4
PTT_15561
25
LLPS-Pyt-0412
PTT_15713
E3S0T4
PTT_15713
26
LLPS-Pyt-0153
PTT_16055
E3S1G7
PTT_16055
27
LLPS-Pyt-1435
PTT_16162
E3S1P6
PTT_16162
28
LLPS-Pyt-0136
PTT_16170
E3S1Q4
PTT_16170
29
LLPS-Pyt-0034
PTT_16176
E3S1R0
PTT_16176
30
LLPS-Pyt-0225
PTT_16329
E3S222
PTT_16329
31
LLPS-Pyt-0650
PTT_16807
E3S320
PTT_16807
32
LLPS-Pyt-1306
PTT_17306
E3S452
PTT_17306
33
LLPS-Pyt-0837
PTT_17762
E3S586
PTT_17762
34
LLPS-Pyt-0012
PTT_18612
E3S746
PTT_18612
35
LLPS-Pyt-1092
PTT_19303
E3S8K3
PTT_19303
36
LLPS-Pyt-0443
PTT_19311
E3S8K9
PTT_19311