Puccinia graminis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 35 genes.  Reviewed (0 or Unreviewed (35

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Pug-0443
PGTG_01071
E3JUL5
ADK1
2
LLPS-Pug-0277
PGTG_15117
E3KXF6
LSM4
3
LLPS-Pug-0335
PGTG_00058
E3JQ19
PGTG_00058
4
LLPS-Pug-1513
PGTG_01299
E3JV93
PGTG_01299
5
LLPS-Pug-0774
PGTG_01580
E3JS66
PGTG_01580
6
LLPS-Pug-0083
PGTG_02128
E3JX92
PGTG_02128
7
LLPS-Pug-0322
PGTG_02327
E3JXU1
PGTG_02327
8
LLPS-Pug-0564
PGTG_02392
E3JY06
PGTG_02392
9
LLPS-Pug-0483
PGTG_02989
E3JYA8
PGTG_02989
10
LLPS-Pug-0974
PGTG_03077
E3JYJ6
PGTG_03077
11
LLPS-Pug-0126
PGTG_03310
E3JZ79
PGTG_03310
12
LLPS-Pug-0152
PGTG_03324
E3JZ93
PGTG_03324
13
LLPS-Pug-1288
PGTG_03377
E3JZE6
PGTG_03377
14
LLPS-Pug-0660
PGTG_04057
E3K1C6
PGTG_04057
15
LLPS-Pug-0086
PGTG_05807
E3K5R5
PGTG_05807
16
LLPS-Pug-1511
PGTG_07034
E3KAJ6
PGTG_07034
17
LLPS-Pug-0069
PGTG_08318
E3KE05
PGTG_08318
18
LLPS-Pug-0143
PGTG_08590
E3KGH9
PGTG_08590
19
LLPS-Pug-0175
PGTG_08749
E3KGY8
PGTG_08749
20
LLPS-Pug-0751
PGTG_10266
E3KKH0
PGTG_10266
21
LLPS-Pug-0275
PGTG_10429
E3KKY3
PGTG_10429
22
LLPS-Pug-1216
PGTG_11388
E3KM71
PGTG_11388
23
LLPS-Pug-0464
PGTG_11670
E3KNN9
PGTG_11670
24
LLPS-Pug-0087
PGTG_13421
E3KTR4
PGTG_13421
25
LLPS-Pug-0253
PGTG_14957
E3KXQ4
PGTG_14957
26
LLPS-Pug-0733
PGTG_15320
E3KYT2
PGTG_15320
27
LLPS-Pug-0585
PGTG_15352
E3KZH1
PGTG_15352
28
LLPS-Pug-0892
PGTG_15953
E3L0Q1
PGTG_15953
29
LLPS-Pug-0084
PGTG_16403
E3L3T7
PGTG_16403
30
LLPS-Pug-1290
PGTG_16473
E3L0X0
PGTG_16473
31
LLPS-Pug-1028
PGTG_18414
E3L5Y8
PGTG_18414
32
LLPS-Pug-0373
PGTG_18611
E3L7T7
PGTG_18611
33
LLPS-Pug-0718
PGTG_18715
E3L7Q8
PGTG_18715
34
LLPS-Pug-1197
PGTG_21567
H6QRZ9
PGTG_21567
35
LLPS-Pug-0666
PGTG_21795
H6QSI2
PGTG_21795