Populus trichocarpa      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 40 genes.  Reviewed (0 or Unreviewed (40

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Pot-0170
POPTR_017G059000v3
2
LLPS-Pot-0374
POPTR_006G213300v3
3
LLPS-Pot-0625
POPTR_002G061200v3
4
LLPS-Pot-0744
POPTR_006G149400v3
5
LLPS-Pot-0747
POPTR_016G075200v3
6
LLPS-Pot-1351
POPTR_012G144800v3
7
LLPS-Pot-2351
POPTR_004G146900v3
8
LLPS-Pot-2808
POPTR_013G070400v3
9
LLPS-Pot-1685
POPTR_002G205700v3
B9GS94
LSM4
10
LLPS-Pot-1797
POPTR_001G160700v3
A0A2K2BYK1
POPTR_001G160700
11
LLPS-Pot-0847
POPTR_001G166100v3
B9GG42
POPTR_001G166100
12
LLPS-Pot-1263
POPTR_001G304000v3
B9GHB4
POPTR_001G304000
13
LLPS-Pot-0161
POPTR_001G402500v3
B9N1J3
POPTR_001G402500
14
LLPS-Pot-0375
POPTR_003G063000v3
A0A2K2B2E5
POPTR_003G063000
15
LLPS-Pot-0090
POPTR_003G148800v3
A0A2K2B7B8
POPTR_003G148800
16
LLPS-Pot-2539
POPTR_003G180100v3
B9GVI5
POPTR_003G180100
17
LLPS-Pot-1344
POPTR_003G220100v3
B9GY72
POPTR_003G220100
18
LLPS-Pot-0232
POPTR_004G155300v3
A9P8Z7
POPTR_004G155300
19
LLPS-Pot-2527
POPTR_005G101200v3
B9H670
POPTR_005G101200
20
LLPS-Pot-1396
POPTR_005G107600v3
U5GEY7
POPTR_005G107600
21
LLPS-Pot-1957
POPTR_006G235000v3
A9PFI9
POPTR_006G235000
22
LLPS-Pot-0598
POPTR_008G039500v3
B9HLL2
POPTR_008G039500
23
LLPS-Pot-0882
POPTR_008G085400v3
A0A2K1ZE17
POPTR_008G085400
24
LLPS-Pot-1716
POPTR_008G133700v3
B9HJF4
POPTR_008G133700
25
LLPS-Pot-0630
POPTR_009G138200v3
A0A2K1Z7M1
POPTR_009G138200
26
LLPS-Pot-0439
POPTR_011G148800v3
A0A2K1YKI5
POPTR_011G148800
27
LLPS-Pot-2515
POPTR_012G017500v3
B9I1Y1
POPTR_012G017500
28
LLPS-Pot-0253
POPTR_012G050300v3
B9I2H7
POPTR_012G050300
29
LLPS-Pot-0969
POPTR_013G088600v3
A0A2K1Y3A3
POPTR_013G088600
30
LLPS-Pot-0853
POPTR_014G052600v3
A0A2K1XQU0
POPTR_014G052600
31
LLPS-Pot-1718
POPTR_014G081100v3
A0A2K1XS94
POPTR_014G081100
32
LLPS-Pot-0491
POPTR_014G174000v3
B9IAZ4
POPTR_014G174000
33
LLPS-Pot-1410
POPTR_015G092800v3
A9PB19
POPTR_015G092800
34
LLPS-Pot-1471
POPTR_017G081000v3
A0A2K1X4Y3
POPTR_017G081000
35
LLPS-Pot-2455
POPTR_017G087900v3
A0A2K1X5A8
POPTR_017G087900
36
LLPS-Pot-0793
POPTR_017G114600v3
A9PHQ1
POPTR_017G114600
37
LLPS-Pot-1643
POPTR_018G002300v3
B9NA29
POPTR_018G002300
38
LLPS-Pot-2269
POPTR_019G032600v3
A0A2K1WNS1
POPTR_019G032600
39
LLPS-Pot-0096
POPTR_019G034900v3
A0A2K1WNY7
POPTR_019G034900
40
LLPS-Pot-2135
POPTR_T099700v3
U5FFZ6
POPTR_T099700