Oryza rufipogon      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 35 genes.  Reviewed (0 or Unreviewed (35

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orr-0002
ORUFI03G32140
A0A0E0P018
2
LLPS-Orr-0004
ORUFI02G39200
A0A0E0NMZ6
3
LLPS-Orr-0239
ORUFI11G21570
A0A0E0RB05
4
LLPS-Orr-0252
ORUFI11G11590
A0A0E0R7G3
5
LLPS-Orr-0283
ORUFI03G18100
A0A0E0NV34
6
LLPS-Orr-0293
ORUFI07G19060
A0A0E0Q9S2
7
LLPS-Orr-0310
ORUFI03G30920
A0A0E0NZL5
8
LLPS-Orr-0504
ORUFI11G19160
A0A0E0RA44
9
LLPS-Orr-0517
ORUFI01G06420
A0A0E0MSI9
10
LLPS-Orr-0520
ORUFI02G17410
A0A0E0NEX7
11
LLPS-Orr-0593
ORUFI02G26990
A0A0E0NIC8
12
LLPS-Orr-0687
ORUFI03G43460
A0A0E0P460
13
LLPS-Orr-0727
ORUFI12G04610
A0A0E0RE84
14
LLPS-Orr-0728
ORUFI08G03710
A0A0E0QEI0
15
LLPS-Orr-0758
ORUFI05G16400
A0A0E0PM24
16
LLPS-Orr-0845
ORUFI01G16310
A0A0E0MVZ9
17
LLPS-Orr-0940
ORUFI04G31350
A0A0E0PFR7
18
LLPS-Orr-1114
ORUFI07G09000
A0A0E0Q673
19
LLPS-Orr-1121
ORUFI11G04630
A0A0E0R4W5
20
LLPS-Orr-1137
ORUFI04G06650
A0A0E0P6K4
21
LLPS-Orr-1323
ORUFI02G38050
A0A0E0NMG6
22
LLPS-Orr-1376
ORUFI05G25160
A0A0E0PQB0
23
LLPS-Orr-1383
ORUFI08G08850
A0A0E0QGB6
24
LLPS-Orr-1411
ORUFI07G10460
A0A0E0Q6Q1
25
LLPS-Orr-1414
ORUFI12G02100
A0A0E0RDB1
26
LLPS-Orr-1513
ORUFI12G18050
A0A0E0RIX5
27
LLPS-Orr-1548
ORUFI05G03660
A0A0E0PHM4
28
LLPS-Orr-1567
ORUFI03G05190
A0A0E0NQD2
29
LLPS-Orr-1605
ORUFI12G19440
A0A0E0RJG1
30
LLPS-Orr-1659
ORUFI04G32430
A0A0E0PG61
31
LLPS-Orr-1791
ORUFI03G27980
A0A0E0NYL4
32
LLPS-Orr-1900
ORUFI12G09160
A0A0E0RFV9
33
LLPS-Orr-1966
ORUFI09G00770
A0A0E0QMW0
34
LLPS-Orr-2079
ORUFI10G16430
A0A0E0R194
35
LLPS-Orr-0836
ORUFI01G10810
A0A0E0MU53
LSM4