Oryza punctata      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 35 genes.  Reviewed (0 or Unreviewed (35

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orp-0042
OPUNC03G27070
A0A0E0KHH2
2
LLPS-Orp-0058
OPUNC11G04510
A0A0E0MD25
3
LLPS-Orp-0185
OPUNC02G14880
A0A0E0JZU7
4
LLPS-Orp-0188
OPUNC03G28130
A0A0E0KHV7
5
LLPS-Orp-0257
OPUNC08G16490
A0A0E0LW46
6
LLPS-Orp-0276
OPUNC08G09500
A0A0E0LTN7
7
LLPS-Orp-0306
OPUNC03G05070
A0A0E0K9D1
8
LLPS-Orp-0328
OPUNC02G31010
A0A0E0K5K9
9
LLPS-Orp-0331
OPUNC05G04650
10
LLPS-Orp-0342
OPUNC02G13930
A0A0E0JZH5
11
LLPS-Orp-0380
OPUNC01G05710
A0A0E0JF38
12
LLPS-Orp-0400
OPUNC02G33690
A0A0E0K6J4
13
LLPS-Orp-0414
OPUNC12G14710
A0A0E0MNR7
14
LLPS-Orp-0457
OPUNC12G04070
A0A0E0MK25
15
LLPS-Orp-0463
OPUNC11G14730
A0A0E0MGK6
16
LLPS-Orp-0538
OPUNC09G08160
A0A0E0M0Z8
17
LLPS-Orp-0607
OPUNC04G17470
A0A0E0KT73
18
LLPS-Orp-0648
OPUNC01G14420
A0A0E0JI74
19
LLPS-Orp-0653
OPUNC07G20700
A0A0E0LNA9
20
LLPS-Orp-0772
OPUNC12G08350
A0A0E0MLJ2
21
LLPS-Orp-0818
OPUNC03G21930
A0A0E0KFP6
22
LLPS-Orp-0914
OPUNC03G38730
A0A0E0KLT2
23
LLPS-Orp-0956
OPUNC04G28240
A0A0E0KX81
24
LLPS-Orp-1080
OPUNC05G03330
A0A0E0KYK6
25
LLPS-Orp-1109
OPUNC07G17200
A0A0E0LM36
26
LLPS-Orp-1205
OPUNC11G09940
A0A0E0MEY8
27
LLPS-Orp-1209
OPUNC12G17940
A0A0E0MPX4
28
LLPS-Orp-1226
OPUNC05G13340
A0A0E0L246
29
LLPS-Orp-1426
OPUNC10G11210
A0A0E0M8L3
30
LLPS-Orp-1430
OPUNC04G27200
A0A0E0KWT9
31
LLPS-Orp-1512
OPUNC07G08410
A0A0E0LIZ0
32
LLPS-Orp-1827
OPUNC08G07280
A0A0E0LSV7
33
LLPS-Orp-1916
OPUNC11G05830
A0A0E0MDJ2
34
LLPS-Orp-2118
OPUNC09G18030
A0A0E0M4K0
35
LLPS-Orp-0267
OPUNC01G09730
A0A0E0JGI9
LSM4