Oryza nivara      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 33 genes.  Reviewed (0 or Unreviewed (33

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orni-0017
ONIVA10G02560
A0A0E0IPM2
2
LLPS-Orni-0037
ONIVA04G29910
A0A0E0H841
3
LLPS-Orni-0040
ONIVA02G38970
A0A0E0GEF6
4
LLPS-Orni-0095
ONIVA09G00770
A0A0E0IG86
5
LLPS-Orni-0101
ONIVA09G08630
A0A0E0IJ32
6
LLPS-Orni-0105
ONIVA03G27320
A0A0E0GQL1
7
LLPS-Orni-0188
ONIVA05G24210
A0A0E0HH42
8
LLPS-Orni-0197
ONIVA01G48150
A0A0E0FY34
9
LLPS-Orni-0279
ONIVA11G17860
A0A0E0J3L7
10
LLPS-Orni-0287
ONIVA01G06740
A0A0E0FHH0
11
LLPS-Orni-0295
ONIVA07G16740
A0A0E0I288
12
LLPS-Orni-0394
ONIVA02G21940
A0A0E0G7Y8
13
LLPS-Orni-0419
ONIVA01G17200
A0A0E0FLC8
14
LLPS-Orni-0524
ONIVA07G17980
A0A0E0I2P6
15
LLPS-Orni-0668
ONIVA02G28020
A0A0E0GAB7
16
LLPS-Orni-0693
ONIVA05G03500
A0A0E0H9I3
17
LLPS-Orni-0844
ONIVA12G03690
A0A0E0J766
18
LLPS-Orni-0943
ONIVA05G05410
A0A0E0HA87
19
LLPS-Orni-1000
ONIVA11G19990
A0A0E0J4D8
20
LLPS-Orni-1021
ONIVA05G10530
A0A0E0HC10
21
LLPS-Orni-1037
ONIVA07G07950
A0A0E0HYU9
22
LLPS-Orni-1070
ONIVA03G05220
A0A0E0GHH3
23
LLPS-Orni-1106
ONIVA11G04640
A0A0E0IYU5
24
LLPS-Orni-1341
ONIVA02G17960
A0A0E0G6L2
25
LLPS-Orni-1501
ONIVA04G28190
A0A0E0H7H7
26
LLPS-Orni-1538
ONIVA05G15730
A0A0E0HDY2
27
LLPS-Orni-1621
ONIVA01G06810
A0A0E0FHH7
28
LLPS-Orni-1734
ONIVA07G04490
A0A0E0HXL9
29
LLPS-Orni-1857
ONIVA04G04050
A0A0E0GYB3
30
LLPS-Orni-2293
ONIVA07G09030
A0A0E0HZ89
31
LLPS-Orni-2367
ONIVA08G08570
A0A0E0I993
32
LLPS-Orni-2409
ONIVA09G20740
A0A0E0INM4
33
LLPS-Orni-0680
ONIVA01G12400
A0A0E0FJL0
LSM4