Helianthus annuus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 38 genes.  Reviewed (0 or Unreviewed (38

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Hea-0165
HannXRQ_Chr15g0473131
A0A251S6R3
AKIN10
2
LLPS-Hea-0080
HannXRQ_Chr13g0404021
A0A251SVN3
AtAUR1
3
LLPS-Hea-2127
HannXRQ_Chr10g0319121
A0A251TRG0
ATPRMT1A
4
LLPS-Hea-0735
HannXRQ_Chr15g0464491
A0A251S565
CDKD1
5
LLPS-Hea-1299
HannXRQ_Chr10g0312291
A0A251TRN9
CID3
6
LLPS-Hea-0560
HannXRQ_Chr02g0041241
A0A251VEJ7
CSTF64
7
LLPS-Hea-0401
HannXRQ_Chr15g0496951
A0A251SDT8
DCP2
8
LLPS-Hea-2774
HannXRQ_Chr17g0552391
A0A251RQQ6
ERF3A
9
LLPS-Hea-1053
HannXRQ_Chr02g0052331
A0A251VHB7
FK
10
LLPS-Hea-1104
HannXRQ_Chr07g0185611
A0A251U9K2
GR-RBP4
11
LLPS-Hea-0687
HannXRQ_Chr02g0056571
A0A251VJG6
HannXRQ_Chr02g0056571
12
LLPS-Hea-1310
HannXRQ_Chr03g0083161
A0A251VBU1
HannXRQ_Chr03g0083161
13
LLPS-Hea-0520
HannXRQ_Chr04g0123231
A0A251V336
HannXRQ_Chr04g0123231
14
LLPS-Hea-0268
HannXRQ_Chr06g0181491
A0A251UJ05
HannXRQ_Chr06g0181491
15
LLPS-Hea-0571
HannXRQ_Chr08g0216931
A0A251U3E2
HannXRQ_Chr08g0216931
16
LLPS-Hea-1749
HannXRQ_Chr10g0281211
A0A251TFD1
HannXRQ_Chr10g0281211
17
LLPS-Hea-2472
HannXRQ_Chr10g0296081
A0A251TJ94
HannXRQ_Chr10g0296081
18
LLPS-Hea-0684
HannXRQ_Chr11g0338831
A0A251TC01
HannXRQ_Chr11g0338831
19
LLPS-Hea-0030
HannXRQ_Chr12g0365931
A0A251T0V9
HannXRQ_Chr12g0365931
20
LLPS-Hea-0180
HannXRQ_Chr12g0376601
A0A251T4H2
HannXRQ_Chr12g0376601
21
LLPS-Hea-1039
HannXRQ_Chr13g0396291
A0A251SPZ3
HannXRQ_Chr13g0396291
22
LLPS-Hea-0375
HannXRQ_Chr13g0407421
A0A251STW7
HannXRQ_Chr13g0407421
23
LLPS-Hea-1253
HannXRQ_Chr13g0415741
A0A251SV14
HannXRQ_Chr13g0415741
24
LLPS-Hea-0916
HannXRQ_Chr15g0494911
A0A251SCB5
HannXRQ_Chr15g0494911
25
LLPS-Hea-1351
HannXRQ_Chr16g0505641
A0A251RXQ5
HannXRQ_Chr16g0505641
26
LLPS-Hea-0353
HannXRQ_Chr16g0520961
A0A251S161
HannXRQ_Chr16g0520961
27
LLPS-Hea-1172
HannXRQ_Chr13g0405821
A0A251ST48
IPO5
28
LLPS-Hea-0536
HannXRQ_Chr05g0153941
A0A251UUL0
KAD4
29
LLPS-Hea-0164
HannXRQ_Chr09g0248151
A0A251TT76
LSM4
30
LLPS-Hea-0435
HannXRQ_Chr04g0107401
A0A251UZE4
NRPB1
31
LLPS-Hea-2060
HannXRQ_Chr08g0212441
A0A251U582
PUX2
32
LLPS-Hea-1309
HannXRQ_Chr13g0405151
A0A251STV6
RH52B
33
LLPS-Hea-1201
HannXRQ_Chr06g0165761
A0A251UGC2
RH6
34
LLPS-Hea-0651
HannXRQ_Chr08g0220201
A0A251U549
RL23A
35
LLPS-Hea-2661
HannXRQ_Chr09g0257831
A0A251TWQ0
SUF4
36
LLPS-Hea-2197
HannXRQ_Chr02g0040581
A0A251VFP2
TRN1
37
LLPS-Hea-0059
HannXRQ_Chr06g0168661
A0A251UFP3
UBP1
38
LLPS-Hea-0778
HannXRQ_Chr04g0105261
A0A251UXY8
XPO1