Erinaceus europaeus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 19 genes.  Reviewed (0 or Unreviewed (19

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ere-0436
ENSEEUG00000012442.1
2
LLPS-Ere-0555
ENSEEUG00000000925.1
3
LLPS-Ere-0880
ENSEEUG00000005821.1
A0A1S2ZR65
AK2
4
LLPS-Ere-0575
ENSEEUG00000009875.1
A0A1S2ZIE8
APP
5
LLPS-Ere-0283
ENSEEUG00000000375.1
A0A1S2ZLI8
EIF4G2
6
LLPS-Ere-0322
ENSEEUG00000014033.1
A0A1S3W4K3
ESRP2
7
LLPS-Ere-0638
ENSEEUG00000001574.1
A0A1S3WJ44
LOC103118989
8
LLPS-Ere-0172
ENSEEUG00000011837.1
A0A1S3AA35
LOC103121119
9
LLPS-Ere-0904
ENSEEUG00000005355.1
A0A1S3ALM9
LOC103125990
10
LLPS-Ere-0001
ENSEEUG00000011265.1
A0A1S3A5N3
LYZL6
11
LLPS-Ere-0841
ENSEEUG00000007021.1
A0A1S2ZPY0
MAP1LC3A
12
LLPS-Ere-0400
ENSEEUG00000002962.1
A0A1S3WGR7
PABPC4
13
LLPS-Ere-0856
ENSEEUG00000006298.1
A0A1S3WL52
RPL23A
14
LLPS-Ere-0355
ENSEEUG00000014615.1
A0A1S3ADS0
RPL5
15
LLPS-Ere-0809
ENSEEUG00000015909.1
A0A1S3WGN3
SQSTM1
16
LLPS-Ere-0598
ENSEEUG00000011071.1
A0A1S2ZM67
SURF6
17
LLPS-Ere-0710
ENSEEUG00000003755.1
A0A1S3AJC2
TARDBP
18
LLPS-Ere-0070
ENSEEUG00000011861.1
A0A1S3AGT3
TIAL1
19
LLPS-Ere-0023
ENSEEUG00000010952.1
A0A1S3WU22
UBQLN2