Chlamydomonas reinhardtii      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 29 genes.  Reviewed (3 or Unreviewed (26

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Chr-0198
CHLRE_01g039300v5
A0A2K3E7A5
CHLRE_01g039300v5
2
LLPS-Chr-0115
CHLRE_16g680900v5
A0A2K3CV27
CHLRE_16g680900v5
3
LLPS-Chr-0000
CHLRE_02g120100v5
P00873
RBCS-1
4
LLPS-Chr-0161
CHLRE_04g220700v5
A8ISU1
ALK2
5
LLPS-Chr-1155
CHLRE_09g388000v5
A8IZJ9
CDKD1
6
LLPS-Chr-0444
CHLRE_01g034000v5
A0A2K3E702
CHLRE_01g034000v5
7
LLPS-Chr-0863
CHLRE_01g063997v5
A0A2K3E8H7
CHLRE_01g063997v5
8
LLPS-Chr-0654
CHLRE_02g076800v5
A8IA67
CHLRE_02g076800v5
9
LLPS-Chr-0826
CHLRE_02g086887v5
A0A2K3E0Z7
CHLRE_02g086887v5
10
LLPS-Chr-1624
CHLRE_06g262400v5
A0A2K3DMS3
CHLRE_06g262400v5
11
LLPS-Chr-1586
CHLRE_06g284750v5
A0A2K3DPW5
CHLRE_06g284750v5
12
LLPS-Chr-1687
CHLRE_06g305200v5
A0A2K3DR96
CHLRE_06g305200v5
13
LLPS-Chr-0077
CHLRE_07g339250v5
A0A2K3DKF3
CHLRE_07g339250v5
14
LLPS-Chr-0271
CHLRE_07g340050v5
A0A2K3DKG5
CHLRE_07g340050v5
15
LLPS-Chr-0806
CHLRE_07g344850v5
A0A2K3DKW8
CHLRE_07g344850v5
16
LLPS-Chr-0220
CHLRE_12g518772v5
A0A2K3D3X5
CHLRE_12g518772v5
17
LLPS-Chr-0924
CHLRE_12g520550v5
A0A2K3D415
CHLRE_12g520550v5
18
LLPS-Chr-1589
CHLRE_12g557600v5
A0A2K3D5Q3
CHLRE_12g557600v5
19
LLPS-Chr-0453
CHLRE_13g567850v5
A0A2K3CZF8
CHLRE_13g567850v5
20
LLPS-Chr-0039
CHLRE_14g633750v5
A0A2K3CZ10
CHLRE_14g633750v5
21
LLPS-Chr-1240
CHLRE_15g643703v5
A0A2K3CX03
CHLRE_15g643703v5
22
LLPS-Chr-1471
CHLRE_16g662702v5
A0A2K3CTM9
CHLRE_16g662702v5
23
LLPS-Chr-0319
CHLRE_04g223850v5
A8IT25
DEH1
24
LLPS-Chr-0405
CHLRE_02g077300v5
A8IA86
NOP1
25
LLPS-Chr-0577
CHLRE_12g533550v5
A8IVR6
PYK1
26
LLPS-Chr-0516
CHLRE_06g282500v5
A8J239
RPL23a
27
LLPS-Chr-0299
CHLRE_14g621450v5
A8HP55
RPL5
28
LLPS-Chr-0663
CHLRE_06g251300v5
A8HYN9
SMP6B
29
LLPS-Chr-0800
CHLRE_03g146487v5
A8J2W2
XPO1