Vitis vinifera      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 19 genes.  Reviewed (0 or Unreviewed (19

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Viv-1477
VIT_00s0181g00120
F6H7T4
VIT_00s0181g00120
2
LLPS-Viv-0984
VIT_00s0322g00040
F6HD47
VIT_00s0322g00040
3
LLPS-Viv-1719
VIT_01s0150g00590
D7TFN0
VIT_01s0150g00590
4
LLPS-Viv-2402
VIT_03s0017g00990
F6HTJ0
VIT_03s0017g00990
5
LLPS-Viv-2003
VIT_03s0063g02610
F6HQM5
VIT_03s0063g02610
6
LLPS-Viv-1143
VIT_04s0008g07000
F6H3K0
VIT_04s0008g07000
7
LLPS-Viv-0943
VIT_06s0004g02910
D7SKY0
VIT_06s0004g02910
8
LLPS-Viv-0127
VIT_06s0004g07530
D7SJN7
VIT_06s0004g07530
9
LLPS-Viv-0059
VIT_07s0104g00160
D7TPE2
VIT_07s0104g00160
10
LLPS-Viv-0029
VIT_08s0007g03130
D7TJ87
VIT_08s0007g03130
11
LLPS-Viv-1079
VIT_08s0007g08090
F6HL45
VIT_08s0007g08090
12
LLPS-Viv-0552
VIT_12s0035g01890
D7TGK7
VIT_12s0035g01890
13
LLPS-Viv-0832
VIT_13s0019g02260
F6HNU2
VIT_13s0019g02260
14
LLPS-Viv-0684
VIT_13s0064g00980
F6HBF5
VIT_13s0064g00980
15
LLPS-Viv-2342
VIT_14s0030g01270
F6HTW5
VIT_14s0030g01270
16
LLPS-Viv-0242
VIT_16s0039g02220
A5BVQ5
VIT_16s0039g02220
17
LLPS-Viv-1001
VIT_16s0050g00880
F6H6E9
VIT_16s0050g00880
18
LLPS-Viv-1110
VIT_17s0000g01720
F6GST1
VIT_17s0000g01720
19
LLPS-Viv-0060
VIT_17s0000g03570
D7SJ02
VIT_17s0000g03570