Populus trichocarpa      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 25 genes.  Reviewed (0 or Unreviewed (25

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Pot-0717
POPTR_009G160600v3
2
LLPS-Pot-1325
POPTR_003G158800v3
3
LLPS-Pot-1351
POPTR_012G144800v3
4
LLPS-Pot-2213
POPTR_004G229700v3
5
LLPS-Pot-2028
POPTR_001G440100v3
B9NAA2
POPTR_001G440100
6
LLPS-Pot-0996
POPTR_002G003400v3
B9GPM6
POPTR_002G003400
7
LLPS-Pot-0156
POPTR_002G054800v3
A9PA33
POPTR_002G054800
8
LLPS-Pot-0408
POPTR_003G022600v3
A0A2K2B0D1
POPTR_003G022600
9
LLPS-Pot-0232
POPTR_004G155300v3
A9P8Z7
POPTR_004G155300
10
LLPS-Pot-0185
POPTR_006G021900v3
A0A2K1ZVK2
POPTR_006G021900
11
LLPS-Pot-0225
POPTR_006G055300v3
A0A2K1ZXB6
POPTR_006G055300
12
LLPS-Pot-0529
POPTR_006G174000v3
A9PB49
POPTR_006G174000
13
LLPS-Pot-2315
POPTR_006G211100v3
A9PB05
POPTR_006G211100
14
LLPS-Pot-1186
POPTR_008G127900v3
B9HJ94
POPTR_008G127900
15
LLPS-Pot-1846
POPTR_010G029500v3
B9HY81
POPTR_010G029500
16
LLPS-Pot-2513
POPTR_011G043000v3
B9HZ06
POPTR_011G043000
17
LLPS-Pot-1000
POPTR_012G095400v3
A0A2K1YBD1
POPTR_012G095400
18
LLPS-Pot-1940
POPTR_013G032300v3
B9I857
POPTR_013G032300
19
LLPS-Pot-0969
POPTR_013G088600v3
A0A2K1Y3A3
POPTR_013G088600
20
LLPS-Pot-0694
POPTR_015G147500v3
B9IDB8
POPTR_015G147500
21
LLPS-Pot-0629
POPTR_016G096800v3
B9IFT1
POPTR_016G096800
22
LLPS-Pot-1814
POPTR_018G016200v3
B9IL87
POPTR_018G016200
23
LLPS-Pot-1948
POPTR_018G138200v3
B9INY9
POPTR_018G138200
24
LLPS-Pot-1950
POPTR_018G140200v3
A0A2K1X0K5
POPTR_018G140200
25
LLPS-Pot-0501
POPTR_019G121400v3
A0A2K1WT20
POPTR_019G121400