Oreochromis niloticus      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 38 genes.  Reviewed (0 or Unreviewed (38

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orn-0110
ENSONIG00000002969.1
I3J4C8
2
LLPS-Orn-0222
ENSONIG00000011401.1
I3JZQ4
3
LLPS-Orn-0408
ENSONIG00000010169.1
I3JV94
4
LLPS-Orn-0413
ENSONIG00000015895.1
I3KFX5
5
LLPS-Orn-0497
ENSONIG00000006786.1
I3JI71
6
LLPS-Orn-1104
ENSONIG00000004170.1
I3J8Q9
7
LLPS-Orn-1194
ENSONIG00000008042.1
I3JMN4
8
LLPS-Orn-1393
ENSONIG00000010608.1
I3JWU1
9
LLPS-Orn-1567
ENSONIG00000013413.1
I3K6W8
10
LLPS-Orn-2278
ENSONIG00000000796.1
I3IWM2
11
LLPS-Orn-2399
ENSONIG00000011064.1
I3JYI3
12
LLPS-Orn-2581
ENSONIG00000002332.1
I3J227
13
LLPS-Orn-3019
ENSONIG00000012436.1
I3K3H0
14
LLPS-Orn-3082
ENSONIG00000012703.1
I3K4E4
15
LLPS-Orn-3237
ENSONIG00000005503.1
I3JDH4
16
LLPS-Orn-0910
ENSONIG00000001609.1
I3IZI0
casp8ap2
17
LLPS-Orn-2650
ENSONIG00000009163.1
I3JRM7
cdk1
18
LLPS-Orn-2164
ENSONIG00000006214.1
I3JG37
coil
19
LLPS-Orn-3590
ENSONIG00000005321.1
I3JCV2
fam118b
20
LLPS-Orn-3378
ENSONIG00000011180.1
I3JYX9
fam192a
21
LLPS-Orn-0455
ENSONIG00000015823.1
I3KFM3
fmr1
22
LLPS-Orn-0233
ENSONIG00000002060.1
I3J131
gtf2f1
23
LLPS-Orn-0951
ENSONIG00000003584.1
I3J6M0
LOC100692921
24
LLPS-Orn-1881
ENSONIG00000010491.1
I3JWE4
LOC100694988
25
LLPS-Orn-0518
ENSONIG00000011799.1
I3K158
LOC100698882
26
LLPS-Orn-1552
ENSONIG00000016330.1
I3KHG7
LOC100709989
27
LLPS-Orn-2272
ENSONIG00000020388.1
I3KX47
nop56
28
LLPS-Orn-1679
ENSONIG00000013196.1
I3K650
nop58
29
LLPS-Orn-1746
ENSONIG00000018267.1
I3KPF7
psme3
30
LLPS-Orn-0389
ENSONIG00000019039.1
I3KS74
ruvbl1
31
LLPS-Orn-0380
ENSONIG00000017516.1
I3KLU2
ruvbl2
32
LLPS-Orn-3877
ENSONIG00000001571.1
I3IZC4
SLC39A1
33
LLPS-Orn-2360
ENSONIG00000002486.1
I3J2M4
snrpd1
34
LLPS-Orn-4113
ENSONIG00000004430.1
I3J9N6
spopl
35
LLPS-Orn-0486
ENSONIG00000012189.1
I3K2K9
sumo1
36
LLPS-Orn-1531
ENSONIG00000015386.1
I3KE11
tert
37
LLPS-Orn-2013
ENSONIG00000009053.1
I3JR91
toe1
38
LLPS-Orn-4042
ENSONIG00000009365.1
I3JSC3
zgpat